Daily Papers

With the popularity of implicit neural representations, or neural radiance fields (NeRF), there is a pressing need for editing methods to interact with the implicit 3D models for tasks like post-processing reconstructed scenes and 3D content creation. While previous works have explored NeRF editing from various perspectives, they are restricted in editing flexibility, quality, and speed, failing to offer direct editing response and instant preview. The key challenge is to conceive a locally editable neural representation that can directly reflect the editing instructions and update instantly. To bridge the gap, we propose a new interactive editing method and system for implicit representations, called Seal-3D, which allows users to edit NeRF models in a pixel-level and free manner with a wide range of NeRF-like backbone and preview the editing effects instantly. To achieve the effects, the challenges are addressed by our proposed proxy function mapping the editing instructions to the original space of NeRF models and a teacher-student training strategy with local pretraining and global finetuning. A NeRF editing system is built to showcase various editing types. Our system can achieve compelling editing effects with an interactive speed of about 1 second.

Image-Text pretraining on web-scale image caption dataset has become the default recipe for open vocabulary classification and retrieval models thanks to the success of CLIP and its variants. Several works have also used CLIP features for dense prediction tasks and have shown the emergence of open-set abilities. However, the contrastive objective only focuses on image-text alignment and does not incentivise image feature learning for dense prediction tasks. In this work, we propose the simple addition of local-to-global correspondence learning by self-distillation as an additional objective for contrastive pre-training to propose SILC. We show that distilling local image features from an exponential moving average (EMA) teacher model significantly improves model performance on several computer vision tasks including classification, retrieval, and especially segmentation. We further show that SILC scales better with the same training duration compared to the baselines. Our model SILC sets a new state of the art for zero-shot classification, few shot classification, image and text retrieval, zero-shot segmentation, and open vocabulary segmentation.

Developing self-supervised learning (SSL) models that can learn universal and transferable representations of H&E gigapixel whole-slide images (WSIs) is becoming increasingly valuable in computational pathology. These models hold the potential to advance critical tasks such as few-shot classification, slide retrieval, and patient stratification. Existing approaches for slide representation learning extend the principles of SSL from small images (e.g., 224 x 224 patches) to entire slides, usually by aligning two different augmentations (or views) of the slide. Yet the resulting representation remains constrained by the limited clinical and biological diversity of the views. Instead, we postulate that slides stained with multiple markers, such as immunohistochemistry, can be used as different views to form a rich task-agnostic training signal. To this end, we introduce Madeleine, a multimodal pretraining strategy for slide representation learning. Madeleine is trained with a dual global-local cross-stain alignment objective on large cohorts of breast cancer samples (N=4,211 WSIs across five stains) and kidney transplant samples (N=12,070 WSIs across four stains). We demonstrate the quality of slide representations learned by Madeleine on various downstream evaluations, ranging from morphological and molecular classification to prognostic prediction, comprising 21 tasks using 7,299 WSIs from multiple medical centers. Code is available at https://github.com/mahmoodlab/MADELEINE.

Contrastive language-image pretraining (CLIP) has been found to be vulnerable to poisoning backdoor attacks where the adversary can achieve an almost perfect attack success rate on CLIP models by poisoning only 0.01\% of the training dataset. This raises security concerns on the current practice of pretraining large-scale models on unscrutinized web data using CLIP. In this work, we analyze the representations of backdoor-poisoned samples learned by CLIP models and find that they exhibit unique characteristics in their local subspace, i.e., their local neighborhoods are far more sparse than that of clean samples. Based on this finding, we conduct a systematic study on detecting CLIP backdoor attacks and show that these attacks can be easily and efficiently detected by traditional density ratio-based local outlier detectors, whereas existing backdoor sample detection methods fail. Our experiments also reveal that an unintentional backdoor already exists in the original CC3M dataset and has been trained into a popular open-source model released by OpenCLIP. Based on our detector, one can clean up a million-scale web dataset (e.g., CC3M) efficiently within 15 minutes using 4 Nvidia A100 GPUs. The code is publicly available in our https://github.com/HanxunH/Detect-CLIP-Backdoor-Samples{GitHub repository}.

Transformers, which were originally developed for natural language processing, have recently generated significant interest in the computer vision and audio communities due to their flexibility in learning long-range relationships. Constrained by the data hungry nature of transformers and the limited amount of labelled data, most transformer-based models for audio tasks are finetuned from ImageNet pretrained models, despite the huge gap between the domain of natural images and audio. This has motivated the research in self-supervised pretraining of audio transformers, which reduces the dependency on large amounts of labeled data and focuses on extracting concise representations of audio spectrograms. In this paper, we propose Local-Global Audio Spectrogram vIsion Transformer, namely ASiT, a novel self-supervised learning framework that captures local and global contextual information by employing group masked model learning and self-distillation. We evaluate our pretrained models on both audio and speech classification tasks, including audio event classification, keyword spotting, and speaker identification. We further conduct comprehensive ablation studies, including evaluations of different pretraining strategies. The proposed ASiT framework significantly boosts the performance on all tasks and sets a new state-of-the-art performance in five audio and speech classification tasks, outperforming recent methods, including the approaches that use additional datasets for pretraining.

This paper introduces a novel approach to enhance the capabilities of Large Language Models (LLMs) in processing and understanding extensive text sequences, a critical aspect in applications requiring deep comprehension and synthesis of large volumes of information. Recognizing the inherent challenges in extending the context window for LLMs, primarily built on Transformer architecture, we propose a new model architecture, referred to as Zebra. This architecture efficiently manages the quadratic time and memory complexity issues associated with full attention in the Transformer by employing grouped local-global attention layers. Our model, akin to a zebra's alternating stripes, balances local and global attention layers, significantly reducing computational requirements and memory consumption. Comprehensive experiments, including pretraining from scratch, continuation of long context adaptation training, and long instruction tuning, are conducted to evaluate the Zebra's performance. The results show that Zebra achieves comparable or superior performance on both short and long sequence benchmarks, while also enhancing training and inference efficiency.

Recent research demonstrates the effectiveness of using pretrained language models (PLM) to improve dense retrieval and multilingual dense retrieval. In this work, we present a simple but effective monolingual pretraining task called contrastive context prediction~(CCP) to learn sentence representation by modeling sentence level contextual relation. By pushing the embedding of sentences in a local context closer and pushing random negative samples away, different languages could form isomorphic structure, then sentence pairs in two different languages will be automatically aligned. Our experiments show that model collapse and information leakage are very easy to happen during contrastive training of language model, but language-specific memory bank and asymmetric batch normalization operation play an essential role in preventing collapsing and information leakage, respectively. Besides, a post-processing for sentence embedding is also very effective to achieve better retrieval performance. On the multilingual sentence retrieval task Tatoeba, our model achieves new SOTA results among methods without using bilingual data. Our model also shows larger gain on Tatoeba when transferring between non-English pairs. On two multi-lingual query-passage retrieval tasks, XOR Retrieve and Mr.TYDI, our model even achieves two SOTA results in both zero-shot and supervised setting among all pretraining models using bilingual data.

Recent advances in large language models have demonstrated the effectiveness of length scaling during post-training, yet its potential in pre-training remains underexplored. We present the Parallel Hidden Decoding Transformer (PHD-Transformer), a novel framework that enables efficient length scaling during pre-training while maintaining inference efficiency. PHD-Transformer achieves this through an innovative KV cache management strategy that distinguishes between original tokens and hidden decoding tokens. By retaining only the KV cache of original tokens for long-range dependencies while immediately discarding hidden decoding tokens after use, our approach maintains the same KV cache size as the vanilla transformer while enabling effective length scaling. To further enhance performance, we introduce two optimized variants: PHD-SWA employs sliding window attention to preserve local dependencies, while PHD-CSWA implements chunk-wise sliding window attention to eliminate linear growth in pre-filling time. Extensive experiments demonstrate consistent improvements across multiple benchmarks.

In this paper, we present significant advancements in the pretraining of Mistral 7B, a large-scale language model, using a dataset of 32.6 GB, equivalent to 1.1 billion tokens. We explore the impact of extending the context length, releasing models with context lengths of 4096 and 32768 tokens, and further refining performance with a specialized 16384 context length instruction-tuned model, we called it Malaysian Mistral. Our experiments demonstrate the efficacy of continue pretraining and the influence of extended context lengths on Mistral 7B's language understanding capabilities. Additionally, we release a model specifically tuned with a 16384 context length instruction, showcasing its potential for capturing nuanced language intricacies. Furthermore, our research contributes to the benchmarking of Malaysian Mistral against prominent language models, including ChatGPT3.5 and Claude 2. We present compelling results indicating Malaysian Mistral's superior performance on Tatabahasa (Malay grammar) test set, particularly when fine-tuned with instructions. All models released at https://huggingface.co/collections/mesolitica/malaysian-mistral-7b-6528f2ec825f4bba46c1700c

Data is one of the most critical elements in building a large language model. However, existing systems either fail to customize a corpus curation pipeline or neglect to leverage comprehensive corpus assessment for iterative optimization of the curation. To this end, we present a pretraining corpus curation and assessment platform called Oasis -- a one-stop system for data quality improvement and quantification with user-friendly interactive interfaces. Specifically, the interactive modular rule filter module can devise customized rules according to explicit feedback. The debiased neural filter module builds the quality classification dataset in a negative-centric manner to remove the undesired bias. The adaptive document deduplication module could execute large-scale deduplication with limited memory resources. These three parts constitute the customized data curation module. And in the holistic data assessment module, a corpus can be assessed in local and global views, with three evaluation means including human, GPT-4, and heuristic metrics. We exhibit a complete process to use Oasis for the curation and assessment of pretraining data. In addition, an 800GB bilingual corpus curated by Oasis is publicly released.

Large Language Models (LLMs) face increasing loss spikes during scaling, undermining training stability and final performance. While gradient clipping mitigates this issue, traditional global approaches poorly handle parameter-specific gradient variations and decaying gradient norms. We propose **AdaGC**, an adaptive gradient clipping framework that automatically adjusts local thresholds per parameter through exponential moving average of gradient norms. Theoretical analysis proves AdaGC's convergence under non-convex conditions. Extensive experiments demonstrate significant improvements: On Llama-2 7B/13B, AdaGC completely eliminates loss spikes while reducing WikiText perplexity by 3.5% (+0.14pp LAMBADA accuracy) for 7B and achieving 0.65% lower training loss with 1.47% reduced validation perplexity for 13B compared to global clipping. For CLIP ViT-Base, AdaGC converges 25% faster than StableAdamW with full spike elimination. The method shows universal effectiveness across architectures (Llama-2 7B/13B) and modalities (CLIP), with successful integration into diverse optimizers like AdamW and Lion. Source code will be released on GitHub.

Accurate medical image segmentation demands the integration of multi-scale information, spanning from local features to global dependencies. However, it is challenging for existing methods to model long-range global information, where convolutional neural networks (CNNs) are constrained by their local receptive fields, and vision transformers (ViTs) suffer from high quadratic complexity of their attention mechanism. Recently, Mamba-based models have gained great attention for their impressive ability in long sequence modeling. Several studies have demonstrated that these models can outperform popular vision models in various tasks, offering higher accuracy, lower memory consumption, and less computational burden. However, existing Mamba-based models are mostly trained from scratch and do not explore the power of pretraining, which has been proven to be quite effective for data-efficient medical image analysis. This paper introduces a novel Mamba-based model, Swin-UMamba, designed specifically for medical image segmentation tasks, leveraging the advantages of ImageNet-based pretraining. Our experimental results reveal the vital role of ImageNet-based training in enhancing the performance of Mamba-based models. Swin-UMamba demonstrates superior performance with a large margin compared to CNNs, ViTs, and latest Mamba-based models. Notably, on AbdomenMRI, Encoscopy, and Microscopy datasets, Swin-UMamba outperforms its closest counterpart U-Mamba_Enc by an average score of 2.72%.

We address the problem of biased gradient estimation in deep Boltzmann machines (DBMs). The existing method to obtain an unbiased estimator uses a maximal coupling based on a Gibbs sampler, but when the state is high-dimensional, it takes a long time to converge. In this study, we propose to use a coupling based on the Metropolis-Hastings (MH) and to initialize the state around a local mode of the target distribution. Because of the propensity of MH to reject proposals, the coupling tends to converge in only one step with a high probability, leading to high efficiency. We find that our method allows DBMs to be trained in an end-to-end fashion without greedy pretraining. We also propose some practical techniques to further improve the performance of DBMs. We empirically demonstrate that our training algorithm enables DBMs to show comparable generative performance to other deep generative models, achieving the FID score of 10.33 for MNIST.

Long-context language models unlock advanced capabilities in reasoning, code generation, and document summarization by leveraging dependencies across extended spans of text. However, a significant portion of readily available long-text data lacks meaningful long-distance dependencies; most spans can be predicted using only local context. Training on such data is inefficient, making careful data selection crucial. Therefore, we introduce LongFilter, a framework for curating training data tailored to long-context pretraining. LongFilter measures the information gain provided by extended context by contrasting model predictions under long-context versus short-context settings, thereby identifying samples where long-range dependencies are essential. Experiments with LLaMA-3-8B, extending its context length from 8K to 64K, show that LongFilter efficiently selects high-quality data and yields substantial improvements on benchmarks such as HELMET, LongBench, and RULER.

We introduce VideoPrism, a general-purpose video encoder that tackles diverse video understanding tasks with a single frozen model. We pretrain VideoPrism on a heterogeneous corpus containing 36M high-quality video-caption pairs and 582M video clips with noisy parallel text (e.g., ASR transcripts). The pretraining approach improves upon masked autoencoding by global-local distillation of semantic video embeddings and a token shuffling scheme, enabling VideoPrism to focus primarily on the video modality while leveraging the invaluable text associated with videos. We extensively test VideoPrism on four broad groups of video understanding tasks, from web video question answering to CV for science, achieving state-of-the-art performance on 30 out of 33 video understanding benchmarks.

Recognizing handwritten mathematical expressions (HMER) is a challenging task due to the inherent two-dimensional structure, varying symbol scales, and complex spatial relationships among symbols. In this paper, we present a self-supervised learning (SSL) framework for HMER that eliminates the need for expensive labeled data. Our approach begins by pretraining an image encoder using a combination of global and local contrastive loss, enabling the model to learn both holistic and fine-grained representations. A key contribution of this work is a novel self-supervised attention network, which is trained using a progressive spatial masking strategy. This attention mechanism is designed to learn semantically meaningful focus regions, such as operators, exponents, and nested mathematical notation, without requiring any supervision. The progressive masking curriculum encourages the network to become increasingly robust to missing or occluded visual information, ultimately improving structural understanding. Our complete pipeline consists of (1) self-supervised pretraining of the encoder, (2) self-supervised attention learning, and (3) supervised fine-tuning with a transformer decoder to generate LATEX sequences. Extensive experiments on CROHME benchmarks demonstrate that our method outperforms existing SSL and fully supervised baselines, validating the effectiveness of our progressive attention mechanism in enhancing HMER performance. Our codebase can be found here.

Since the rise of large language models (LLMs), the domain adaptation has been one of the hot topics in various domains. Many medical LLMs trained with English medical dataset have made public recently. However, Japanese LLMs in medical domain still lack its research. Here we utilize multiple 70B-parameter LLMs for the first time and show that instruction tuning using Japanese medical question-answering dataset significantly improves the ability of Japanese LLMs to solve Japanese medical license exams, surpassing 50\% in accuracy. In particular, the Japanese-centric models exhibit a more significant leap in improvement through instruction tuning compared to their English-centric counterparts. This underscores the importance of continual pretraining and the adjustment of the tokenizer in our local language. We also examine two slightly different prompt formats, resulting in non-negligible performance improvement.

Natural language generation (NLG) benchmarks provide an important avenue to measure progress and develop better NLG systems. Unfortunately, the lack of publicly available NLG benchmarks for low-resource languages poses a challenging barrier for building NLG systems that work well for languages with limited amounts of data. Here we introduce IndoNLG, the first benchmark to measure natural language generation (NLG) progress in three low-resource -- yet widely spoken -- languages of Indonesia: Indonesian, Javanese, and Sundanese. Altogether, these languages are spoken by more than 100 million native speakers, and hence constitute an important use case of NLG systems today. Concretely, IndoNLG covers six tasks: summarization, question answering, chit-chat, and three different pairs of machine translation (MT) tasks. We collate a clean pretraining corpus of Indonesian, Sundanese, and Javanese datasets, Indo4B-Plus, which is used to pretrain our models: IndoBART and IndoGPT. We show that IndoBART and IndoGPT achieve competitive performance on all tasks -- despite using only one-fifth the parameters of a larger multilingual model, mBART-LARGE (Liu et al., 2020). This finding emphasizes the importance of pretraining on closely related, local languages to achieve more efficient learning and faster inference for very low-resource languages like Javanese and Sundanese.

Radiologic diagnostic errors-under-reading errors, inattentional blindness, and communication failures-remain prevalent in clinical practice. These issues often stem from missed localized abnormalities, limited global context, and variability in report language. These challenges are amplified in 3D imaging, where clinicians must examine hundreds of slices per scan. Addressing them requires systems with precise localized detection, global volume-level reasoning, and semantically consistent natural language reporting. However, existing 3D vision-language models are unable to meet all three needs jointly, lacking local-global understanding for spatial reasoning and struggling with the variability and noise of uncurated radiology reports. We present MedVista3D, a multi-scale semantic-enriched vision-language pretraining framework for 3D CT analysis. To enable joint disease detection and holistic interpretation, MedVista3D performs local and global image-text alignment for fine-grained representation learning within full-volume context. To address report variability, we apply language model rewrites and introduce a Radiology Semantic Matching Bank for semantics-aware alignment. MedVista3D achieves state-of-the-art performance on zero-shot disease classification, report retrieval, and medical visual question answering, while transferring well to organ segmentation and prognosis prediction. Code and datasets will be released.

While large pretrained Transformer models have proven highly capable at tackling natural language tasks, handling long sequence inputs continues to be a significant challenge. One such task is long input summarization, where inputs are longer than the maximum input context of most pretrained models. Through an extensive set of experiments, we investigate what model architectural changes and pretraining paradigms can most efficiently adapt a pretrained Transformer for long input summarization. We find that a staggered, block-local Transformer with global encoder tokens strikes a good balance of performance and efficiency, and that an additional pretraining phase on long sequences meaningfully improves downstream summarization performance. Based on our findings, we introduce PEGASUS-X, an extension of the PEGASUS model with additional long input pretraining to handle inputs of up to 16K tokens. PEGASUS-X achieves strong performance on long input summarization tasks comparable with much larger models while adding few additional parameters and not requiring model parallelism to train.

Training neural networks involves solving large-scale non-convex optimization problems. This task has long been believed to be extremely difficult, with fear of local minima and other obstacles motivating a variety of schemes to improve optimization, such as unsupervised pretraining. However, modern neural networks are able to achieve negligible training error on complex tasks, using only direct training with stochastic gradient descent. We introduce a simple analysis technique to look for evidence that such networks are overcoming local optima. We find that, in fact, on a straight path from initialization to solution, a variety of state of the art neural networks never encounter any significant obstacles.

Pixel-level labels are particularly expensive to acquire. Hence, pretraining is a critical step to improve models on a task like semantic segmentation. However, prominent algorithms for pretraining neural networks use image-level objectives, e.g. image classification, image-text alignment a la CLIP, or self-supervised contrastive learning. These objectives do not model spatial information, which might be sub-optimal when finetuning on downstream tasks with spatial reasoning. In this work, we pretrain network with a location-aware (LOCA) self-supervised method which fosters the emergence of strong dense features. Specifically, we use both a patch-level clustering scheme to mine dense pseudo-labels and a relative location prediction task to encourage learning about object parts and their spatial arrangements. Our experiments show that LOCA pretraining leads to representations that transfer competitively to challenging and diverse semantic segmentation datasets.